Single particle cryo-EM map and model validation: It's not crystal clear.
Lander GC
Curr Opin Struct Biol ; [Epub ahead of print]
Published Sep 17, 2024

Importance of the Cysteine-Rich Domain of Snake Venom Prothrombin Activators: Insights Gained from Synthetic Neutralizing Antibodies.
Misson Mindrebo LE, Mindrebo JT, Tran Q, Wilkinson MC, Smith JM, Verma M, Casewell NR, Lander GC, Jardine JG
Toxins (Basel) ; 16 (8).
Published Aug 15, 2024

Bis-sulfonamido-2-phenylbenzoxazoles Validate the GroES/EL Chaperone System as a Viable Antibiotic Target.
Godek J, Sivinski J, Watson ER, Lebario F, Xu W, Stevens M, Zerio CJ, Ambrose AJ, Zhu X, Trindl CA, Zhang DD, Johnson SM, Lander GC, Chapman E
J Am Chem Soc ; [Epub ahead of print]
Published Jul 23, 2024

High-resolution single-particle imaging at 100-200 keV with the Gatan Alpine direct electron detector.
Chan LM, Courteau BJ, Maker A, Wu M, Basanta B, Mehmood H, Bulkley D, Joyce D, Lee BC, Mick S, Czarnik C, Gulati S, Lander GC, Verba KA
J Struct Biol ; [Epub ahead of print]
Published Jun 27, 2024
Associated preprint (posted February 18, 2024)

Structural basis for alpha-tubulin-specific and modification state-dependent glutamylation.
Mahalingan KK, Grotjahn DA, Li Y, Lander GC, Zehr EA, Roll-Mecak A
Nat Chem Biol ; [Epub ahead of print]
Published Apr 24, 2024

Community recommendations on cryoEM data archiving and validation.
Kleywegt GJ, Adams PD, Butcher SJ, Lawson CL, Rohou A, Rosenthal PB, Subramaniam S, Topf M, Abbott S, Baldwin PR, Berrisford JM, Bricogne G, Choudhary P, Croll TI, Danev R, Ganesan SJ, Grant T, Gutmanas A, Henderson R, Heymann JB, Huiskonen JT, Istrate A, Kato T, Lander GC, Lok SM, Ludtke SJ, Murshudov GN, Pye R, Pintilie GD, Richardson JS, Sachse C, Salih O, Scheres SHW, Schroeder GF, Sorzano COS, Stagg SM, Wang Z, Warshamanage R, Westbrook JD, Winn MD, Young JY, Burley SK, Hoch JC, Kurisu G, Morris K, Patwardhan A, Velankar S
IUCrJ ; [Epub ahead of print]
Published Mar 1, 2024
Associated preprint (posted November 29, 2023)

The N1 domain of the peroxisomal AAA-ATPase Pex6 is required for Pex15 binding and proper assembly with Pex1.
Ali BA, Judy RM, Chowdhury S, Jacobsen NK, Castanzo DT, Carr KL, Richardson CD, Lander GC, Martin A, Gardner BM
J Biol Chem ; [Epub ahead of print]
Published Nov 29, 2023
Associated preprint (posted September 16, 2023)

Structure reveals why genome folding is necessary for site-specific integration of foreign DNA into CRISPR arrays.
Santiago-Frangos A, Henriques WS, Wiegand T, Gauvin CC, Buyukyoruk M, Graham AB, Wilkinson RA, Triem L, Neselu K, Eng ET, Lander GC, Wiedenheft B
Nat Struct Mol Biol ; [Epub ahead of print]
Published Sep 14, 2023
Associated preprint (posted May 26, 2023)

Succinylation of a KEAP1 sensor lysine promotes NRF2 activation.
Ibrahim L, Stanton C, Nutsch K, Nguyen T, Li-Ma C, Ko Y, Lander GC, Wiseman RL, Bollong MJ
Cell Chem Biol ; 30 (10): 1295-1302.e4.
Published Oct 19, 2023
Associated preprint (posted May 9, 2023)

Structural basis for a degenerate tRNA identity code and the evolution of bimodal specificity in human mitochondrial tRNA recognition.
Kuhle B, Hirschi M, Doerfel LK, Lander GC, Schimmel P
Nat Commun ; 14 (1): 4794.
Published Aug 9, 2023

Fabrication of Monolayer Graphene-Coated Grids for Cryoelectron Microscopy.
Basanta B, Chen W, Pride DE, Lander GC
J Vis Exp ; (199).
Published Sep 8, 2023

DELE1 oligomerization promotes integrated stress response activation.
Yang J, Baron KR, Pride DE, Schneemann A, Guo X, Chen W, Song AS, Aviles G, Kampmann M, Luke Wiseman R, Lander GC
Nat Struct Mol Biol ; 30 (9): 1295-1302.
Published Sep 2023
Associated preprint (posted October 2, 2022)

Molecular glue CELMoD compounds are regulators of cereblon conformation.
Watson ER, Novick S, Matyskiela ME, Chamberlain PP, H de la Pena A, Zhu J, Tran E, Griffin PR, Wertz IE, Lander GC
Science ; 378 (6619): 549-553.
Published Nov 4, 2022
Associated preprint (posted July 3, 2022)

Structure of the hepatitis C virus E1E2 glycoprotein complex.
Torrents de la Pena A, Sliepen K, Eshun-Wilson L, Newby ML, Allen JD, Zon I, Koekkoek S, Chumbe A, Crispin M, Schinkel J, Lander GC, Sanders RW, Ward AB
Science ; 378 (6617): 263-269.
Published Oct 21, 2022
Associated preprint (posted December 16, 2021)

Structural basis for shape-selective recognition and aminoacylation of a D-armless human mitochondrial tRNA.
Kuhle B, Hirschi M, Doerfel LK, Lander GC, Schimmel P
Nat Commun ; 13 (1): 5100.
Published Aug 30, 2022

Coupling of distant ATPase domains in the circadian clock protein KaiC.
Swan JA, Sandate CR, Chavan AG, Freeberg AM, Etwaru D, Ernst DC, Palacios JG, Golden SS, LiWang A, Lander GC, Partch CL
Nat Struct Mol Biol ; 29 (8): 759-766.
Published Aug 2022
Associated preprint (posted September 15, 2021)

The YPhi motif defines the structure-activity relationships of human 20S proteasome activators.
Opoku-Nsiah KA, de la Pena AH, Williams SK, Chopra N, Sali A, Lander GC, Gestwicki JE
Nat Commun ; 13 (1): 1226.
Published Mar 9, 2022
Associated preprint (posted berTA - URL - , Dece)

Allosteric differences dictate GroEL complementation of E. coli.
Sivinski J, Ngo D, Zerio CJ, Ambrose AJ, Watson ER, Kaneko LK, Kostelic MM, Stevens M, Ray AM, Park Y, Wu C, Marty MT, Hoang QQ, Zhang DD, Lander GC, Johnson SM, Chapman E
FASEB J ; 36 (3): e22198.
Published Mar 2022

Cryo-EM structure of hexameric yeast Lon protease (PIM1) highlights the importance of conserved structural elements.
Yang J, Song AS, Wiseman RL, Lander GC
J Biol Chem ; 298 (3): 101694.
Published Mar 2022
Associated preprint (posted November 25, 2021)

A case for glycerol as an acceptable additive for single-particle cryoEM samples.
Basanta B, Hirschi MM, Grotjahn DA, Lander GC
Acta Crystallogr D Struct Biol ; 78 (Pt 1): 124-135.
Published Jan 1, 2022
Associated preprint (posted September 11, 2021)

Conquer by cryo-EM without physically dividing.
Lander GC, Glaeser RM
Biochem Soc Trans ; 49 (5): 2287-2298.
Published Nov 1, 2021
Associated preprint (posted September 9, 2021)

Structural basis for piRNA targeting.
Anzelon TA, Chowdhury S, Hughes SM, Xiao Y, Lander GC, MacRae IJ
Nature ; 597 (7875): 285-289.
Published Sep 2021
Associated preprint (posted December 7, 2020)

Structures of the human LONP1 protease reveal regulatory steps involved in protease activation.
Shin M, Watson ER, Song AS, Mindrebo JT, Novick SJ, Griffin PR, Wiseman RL, Lander GC
Nat Commun ; 12 (1): 3239.
Published May 28, 2021
Associated preprint (posted November 23, 2020)

A guided approach for subtomogram averaging of challenging macromolecular assemblies.
Basanta B, Chowdhury S, Lander GC, Grotjahn DA
J Struct Biol X ; 4: 100041.
Published 2020
Associated preprint (posted February 2, 2020)

Present and Emerging Methodologies in Cryo-EM Single-Particle Analysis.
Wu M, Lander GC
Biophys J ; 119 (7): 1281-1289.
Published Oct 6, 2020

Sub-2 Angstrom resolution structure determination using single-particle cryo-EM at 200keV.
Wu M, Lander GC, Herzik MA Jr
J Struct Biol X ; 4: 100020.
Published 2020
Associated preprint (posted November 26, 2019)

How low can we go? Structure determination of small biological complexes using single-particle cryo-EM.
Wu M, Lander GC
Curr Opin Struct Biol ; 64: 9-16.
Published Oct 2020

Structural basis for distinct operational modes and protease activation in AAA+ protease Lon.
Shin M, Puchades C, Asmita A, Puri N, Adjei E, Wiseman RL, Karzai AW, Lander GC
Sci Adv ; 6 (21): eaba8404.
Published May 2020
Associated preprint (posted April 24, 2019)

AcrIF9 tethers non-sequence specific dsDNA to the CRISPR RNA-guided surveillance complex.
Hirschi M, Lu WT, Santiago-Frangos A, Wilkinson R, Golden SM, Davidson AR, Lander GC, Wiedenheft B
Nat Commun ; 11 (1): 2730.
Published Jun 1, 2020

Dynamics at the serine loop underlie differential affinity of cryptochromes for CLOCK:BMAL1 to control circadian timing.
Fribourgh JL, Srivastava A, Sandate CR, Michael AK, Hsu PL, Rakers C, Nguyen LT, Torgrimson MR, Parico GCG, Tripathi S, Zheng N, Lander GC, Hirota T, Tama F, Partch CL
Elife ; 9.
Published Feb 26, 2020
Associated preprint (posted August 20, 2019)

The molecular principles governing the activity and functional diversity of AAA+ proteins.
Puchades C, Sandate CR, Lander GC
Nat Rev Mol Cell Biol ; 21 (1): 43-58.
Published Jan 2020

Specific lid-base contacts in the 26s proteasome control the conformational switching required for substrate degradation.
Greene ER, Goodall EA, de la Pena AH, Matyskiela ME, Lander GC, Martin A
Elife ; 8.
Published Nov 28, 2019
Associated preprint (posted July 2, 2019)

Current outcomes when optimizing 'standard' sample preparation for single-particle cryo-EM.
Carragher B, Cheng Y, Frost A, Glaeser RM, Lander GC, Nogales E, Wang HW
J Microsc ; 276 (1): 39-45.
Published Oct 2019

Visualizing structural transitions of ligand-dependent gating of the TRPM2 channel.
Yin Y, Wu M, Hsu AL, Borschel WF, Borgnia MJ, Lander GC, Lee SY
Nat Commun ; 10 (1): 3740.
Published Aug 20, 2019
Associated preprint (posted January 9, 2019)

Unique Structural Features of the Mitochondrial AAA+ Protease AFG3L2 Reveal the Molecular Basis for Activity in Health and Disease.
Puchades C, Ding B, Song A, Wiseman RL, Lander GC, Glynn SE
Mol Cell ; 75 (5): 1073-1085.e6.
Published Sep 5, 2019
Associated preprint (posted February 15, 2019)

An allosteric network in spastin couples multiple activities required for microtubule severing.
Sandate CR, Szyk A, Zehr EA, Lander GC, Roll-Mecak A
Nat Struct Mol Biol ; 26 (8): 671-678.
Published Aug 2019

Setting the dynein motor in motion: New insights from electron tomography.
Grotjahn DA, Lander GC
J Biol Chem ; 294 (36): 13202-13217.
Published Sep 6, 2019

Structure Reveals a Mechanism of CRISPR-RNA-Guided Nuclease Recruitment and Anti-CRISPR Viral Mimicry.
Rollins MF, Chowdhury S, Carter J, Golden SM, Miettinen HM, Santiago-Frangos A, Faith D, Lawrence CM, Lander GC, Wiedenheft B
Mol Cell ; 74 (1): 132-142.e5.
Published Apr 4, 2019
Associated preprint (posted October 26, 2018)

High-resolution structure determination of sub-100 kDa complexes using conventional cryo-EM.
Herzik MA Jr, Wu M, Lander GC
Nat Commun ; 10 (1): 1032.
Published Mar 4, 2019
Associated preprint (posted December 7, 2018)

A Multi-model Approach to Assessing Local and Global Cryo-EM Map Quality.
Herzik MA Jr, Fraser JS, Lander GC
Structure ; 27 (2): 344-358.e3.
Published Feb 5, 2019
Associated preprint (posted April 19, 2017)

The rod-shaped ATG2A-WIPI4 complex tethers membranes in vitro.
Otomo T, Chowdhury S, Lander GC
Contact (Thousand Oaks) ; 1.
Published Jan-Dec 2018

Conformational ensemble of the human TRPV3 ion channel.
Zubcevic L, Herzik MA Jr, Wu M, Borschel WF, Hirschi M, Song AS, Lander GC, Lee SY
Nat Commun ; 9 (1): 4773.
Published Nov 14, 2018
Associated preprint (posted August 20, 2018)

Substrate-engaged 26S proteasome structures reveal mechanisms for ATP-hydrolysis-driven translocation.
de la Pena AH, Goodall EA, Gates SN, Lander GC, Martin A
Science ; 362 (6418).
Published Nov 30, 2018
Associated preprint (posted August 16, 2018)

Insights into autophagosome biogenesis from structural and biochemical analyses of the ATG2A-WIPI4 complex.
Chowdhury S, Otomo C, Leitner A, Ohashi K, Aebersold R, Lander GC, Otomo T
Proc Natl Acad Sci U S A ; 115 (42): E9792-E9801.
Published Oct 16, 2018
Associated preprint (posted August 24, 2017)

Cryo-EM structure of a mitochondrial calcium uniporter.
Yoo J, Wu M, Yin Y, Herzik MA Jr, Lander GC, Lee SY
Science ; 361 (6401): 506-511.
Published Aug 3, 2018

Exploring applications of crowdsourcing to cryo-EM.
Bruggemann J, Lander GC, Su AI
J Struct Biol ; 203 (1): 37-45.
Published Jul 2018
Associated preprint (posted November 15, 2017)

Cryo-electron tomography reveals that dynactin recruits a team of dyneins for processive motility.
Grotjahn DA, Chowdhury S, Xu Y, McKenney RJ, Schroer TA, Lander GC
Nat Struct Mol Biol ; 25 (3): 203-207.
Published Mar 2018
Associated preprint (posted August 31, 2017)

The peroxisomal AAA-ATPase Pex1/Pex6 unfolds substrates by processive threading.
Gardner BM, Castanzo DT, Chowdhury S, Stjepanovic G, Stefely MS, Hurley JH, Lander GC, Martin A
Nat Commun ; 9 (1): 135.
Published Jan 10, 2018

Structure of the cold- and menthol-sensing ion channel TRPM8.
Yin Y, Wu M, Zubcevic L, Borschel WF, Lander GC, Lee SY
Science ; 359 (6372): 237-241.
Published Jan 12, 2018

Structure of the mitochondrial inner membrane AAA+ protease YME1 gives insight into substrate processing.
Puchades C, Rampello AJ, Shin M, Giuliano CJ, Wiseman RL, Glynn SE, Lander GC
Science ; 358 (6363).
Published Nov 3, 2017
Associated preprint (posted September 15, 2017)

Cryo-electron microscopy structure of the lysosomal calcium-permeable channel TRPML3.
Hirschi M, Herzik MA Jr, Wie J, Suo Y, Borschel WF, Ren D, Lander GC, Lee SY
Nature ; 550 (7676): 411-414.
Published Oct 19, 2017

Achieving better-than-3-A resolution by single-particle cryo-EM at 200 keV.
Herzik MA Jr, Wu M, Lander GC
Nat Methods ; 14 (11): 1075-1078.
Published Nov 2017
Associated preprint (posted May 25, 2017)

The endoplasmic reticulum HSP40 co-chaperone ERdj3/DNAJB11 assembles and functions as a tetramer.
Chen KC, Qu S, Chowdhury S, Noxon IC, Schonhoft JD, Plate L, Powers ET, Kelly JW, Lander GC, Wiseman RL
EMBO J ; 36 (15): 2296-2309.
Published Aug 1, 2017

Cas1 and the Csy complex are opposing regulators of Cas2/3 nuclease activity.
Rollins MF, Chowdhury S, Carter J, Golden SM, Wilkinson RA, Bondy-Denomy J, Lander GC, Wiedenheft B
Proc Natl Acad Sci U S A ; 114 (26): E5113-E5121.
Published Jun 27, 2017

Structure Reveals Mechanisms of Viral Suppressors that Intercept a CRISPR RNA-Guided Surveillance Complex.
Chowdhury S, Carter J, Rollins MF, Golden SM, Jackson RN, Hoffmann C, Nosaka L, Bondy-Denomy J, Maxwell KL, Davidson AR, Fischer ER, Lander GC, Wiedenheft B
Cell ; 169 (1): 47-57.e11.
Published Mar 23, 2017

What's the Key to Unlocking the Proteasome's Gate?
de la Pena AH, Lander GC
Structure ; 24 (12): 2037-2038.
Published Dec 6, 2016

Isolation of yeast complex IV in native lipid nanodiscs.
Smirnova IA, Sjostrand D, Li F, Bjorck M, Schafer J, Ostbye H, Hogbom M, von Ballmoos C, Lander GC, Adelroth P, Brzezinski P
Biochim Biophys Acta ; 1858 (12): 2984-2992.
Published Dec 2016

A novel cereblon modulator recruits GSPT1 to the CRL4(CRBN) ubiquitin ligase.
Matyskiela ME, Lu G, Ito T, Pagarigan B, Lu CC, Miller K, Fang W, Wang NY, Nguyen D, Houston J, Carmel G, Tran T, Riley M, Nosaka L, Lander GC, Gaidarova S, Xu S, Ruchelman AL, Handa H, Carmichael J, Daniel TO, Cathers BE, Lopez-Girona A, Chamberlain PP
Nature ; 535 (7611): 252-7.
Published Jul 14, 2016

Cryo-electron microscopy structure of the TRPV2 ion channel.
Zubcevic L, Herzik MA Jr, Chung BC, Liu Z, Lander GC, Lee SY
Nat Struct Mol Biol ; 23 (2): 180-186.
Published Feb 2016

Atomic structure of the 26S proteasome lid reveals the mechanism of deubiquitinase inhibition.
Dambacher CM, Worden EJ, Herzik MA, Martin A, Lander GC
Elife ; 5: e13027.
Published Jan 8, 2016

Thermodynamic Interrogation of the Assembly of a Viral Genome Packaging Motor Complex.
Yang TC, Ortiz D, Nosaka L, Lander GC, Catalano CE
Biophys J ; 109 (8): 1663-75.
Published Oct 20, 2015

Protein domain mapping by internal labeling and single particle electron microscopy.
Ciferri C, Lander GC, Nogales E
J Struct Biol ; 192 (2): 159-62.
Published Nov 2015

Site-specific labeling of proteins for electron microscopy.
Dambacher CM, Lander GC
J Struct Biol ; 192 (2): 151-8.
Published Nov 2015

Ubp6 deubiquitinase controls conformational dynamics and substrate degradation of the 26S proteasome.
Bashore C, Dambacher CM, Goodall EA, Matyskiela ME, Lander GC, Martin A
Nat Struct Mol Biol ; 22 (9): 712-9.
Published Sep 2015

Architecture of the Complex Formed by Large and Small Terminase Subunits from Bacteriophage P22.
McNulty R, Lokareddy RK, Roy A, Yang Y, Lander GC, Heck AJR, Johnson JE, Cingolani G
J Mol Biol ; 427 (20): 3285-3299.
Published Oct 9, 2015

Multivalent Microtubule Recognition by Tubulin Tyrosine Ligase-like Family Glutamylases.
Garnham CP, Vemu A, Wilson-Kubalek EM, Yu I, Szyk A, Lander GC, Milligan RA, Roll-Mecak A
Cell ; 161 (5): 1112-1123.
Published May 21, 2015

Structural organization of the dynein-dynactin complex bound to microtubules.
Chowdhury S, Ketcham SA, Schroer TA, Lander GC
Nat Struct Mol Biol ; 22 (4): 345-7.
Published Apr 2015

The Pex1/Pex6 complex is a heterohexameric AAA+ motor with alternating and highly coordinated subunits.
Gardner BM, Chowdhury S, Lander GC, Martin A
J Mol Biol ; 427 (6 Pt B): 1375-1388.
Published Mar 27, 2015

Solid-to-fluid-like DNA transition in viruses facilitates infection.
Liu T, Sae-Ueng U, Li D, Lander GC, Zuo X, Jonsson B, Rau D, Shefer I, Evilevitch A
Proc Natl Acad Sci U S A ; 111 (41): 14675-80.
Published Oct 14, 2014

High-resolution microtubule structures reveal the structural transitions in alphabeta-tubulin upon GTP hydrolysis.
Alushin GM, Lander GC, Kellogg EH, Zhang R, Baker D, Nogales E
Cell ; 157 (5): 1117-29.
Published May 22, 2014

Characterization of virus-like particles in GARDASIL(R) by cryo transmission electron microscopy.
Zhao Q, Potter CS, Carragher B, Lander G, Sworen J, Towne V, Abraham D, Duncan P, Washabaugh MW, Sitrin RD
Hum Vaccin Immunother ; 10 (3): 734-9.
Published 2014

Conformational switching of the 26S proteasome enables substrate degradation.
Matyskiela ME, Lander GC, Martin A
Nat Struct Mol Biol ; 20 (7): 781-8.
Published Jul 2013

The proteasome under the microscope: the regulatory particle in focus.
Lander GC, Martin A, Nogales E
Curr Opin Struct Biol ; 23 (2): 243-51.
Published Apr 2013

DNA bending-induced phase transition of encapsidated genome in phage lambda.
Lander GC, Johnson JE, Rau DC, Potter CS, Carragher B, Evilevitch A
Nucleic Acids Res ; 41 (8): 4518-24.
Published Apr 2013

Molecular architecture of human polycomb repressive complex 2.
Ciferri C, Lander GC, Maiolica A, Herzog F, Aebersold R, Nogales E
Elife ; 1: e00005.
Published Oct 30, 2012

Go hybrid: EM, crystallography, and beyond.
Lander GC, Saibil HR, Nogales E
Curr Opin Struct Biol ; 22 (5): 627-35.
Published Oct 2012

Small terminase couples viral DNA binding to genome-packaging ATPase activity.
Roy A, Bhardwaj A, Datta P, Lander GC, Cingolani G
Structure ; 20 (8): 1403-13.
Published Aug 8, 2012

Capsomer dynamics and stabilization in the T = 12 marine bacteriophage SIO-2 and its procapsid studied by CryoEM.
Lander GC, Baudoux AC, Azam F, Potter CS, Carragher B, Johnson JE
Structure ; 20 (3): 498-503.
Published Mar 7, 2012

Complete subunit architecture of the proteasome regulatory particle.
Lander GC, Estrin E, Matyskiela ME, Bashore C, Nogales E, Martin A
Nature ; 482 (7384): 186-91.
Published Jan 11, 2012

Genomic and functional analysis of Vibrio phage SIO-2 reveals novel insights into ecology and evolution of marine siphoviruses.
Baudoux AC, Hendrix RW, Lander GC, Bailly X, Podell S, Paillard C, Johnson JE, Potter CS, Carragher B, Azam F
Environ Microbiol ; 14 (8): 2071-86.
Published Aug 2012

Structures of the RNA-guided surveillance complex from a bacterial immune system.
Wiedenheft B, Lander GC, Zhou K, Jore MM, Brouns SJJ, van der Oost J, Doudna JA, Nogales E
Nature ; 477 (7365): 486-489.
Published Sep 21, 2011

Peering down the barrel of a bacteriophage portal: the genome packaging and release valve in p22.
Tang J, Lander GC, Olia AS, Li R, Casjens S, Prevelige P Jr, Cingolani G, Baker TS, Johnson JE
Structure ; 19 (4): 496-502.
Published Apr 13, 2011

Molecular architecture and connectivity of the budding yeast Mtw1 kinetochore complex.
Hornung P, Maier M, Alushin GM, Lander GC, Nogales E, Westermann S
J Mol Biol ; 405 (2): 548-59.
Published Jan 14, 2011

Crystal structure of group II chaperonin in the open state.
Huo Y, Hu Z, Zhang K, Wang L, Zhai Y, Zhou Q, Lander G, Zhu J, He Y, Pang X, Xu W, Bartlam M, Dong Z, Sun F
Structure ; 18 (10): 1270-9.
Published Oct 13, 2010

Subunits fold at position-dependent rates during maturation of a eukaryotic RNA virus.
Matsui T, Lander GC, Khayat R, Johnson JE
Proc Natl Acad Sci U S A ; 107 (32): 14111-5.
Published Aug 10, 2010

An automated procedure for detecting protein folds from sub-nanometer resolution electron density.
Khayat R, Lander GC, Johnson JE
J Struct Biol ; 170 (3): 513-21.
Published Jun 2010

A toolbox for ab initio 3-D reconstructions in single-particle electron microscopy.
Voss NR, Lyumkis D, Cheng A, Lau PW, Mulder A, Lander GC, Brignole EJ, Fellmann D, Irving C, Jacovetty EL, Leung A, Pulokas J, Quispe JD, Winkler H, Yoshioka C, Carragher B, Potter CS
J Struct Biol ; 169 (3): 389-98.
Published Mar 2010

The P22 tail machine at subnanometer resolution reveals the architecture of an infection conduit.
Lander GC, Khayat R, Li R, Prevelige PE, Potter CS, Carragher B, Johnson JE
Structure ; 17 (6): 789-99.
Published Jun 10, 2009

Drosophila A virus is an unusual RNA virus with a T=3 icosahedral core and permuted RNA-dependent RNA polymerase.
Ambrose RL, Lander GC, Maaty WS, Bothner B, Johnson JE, Johnson KN
J Gen Virol ; 90 (Pt 9): 2191-200.
Published Sep 2009

Ab initio maximum likelihood reconstruction from cryo electron microscopy images of an infectious virion of the tailed bacteriophage P22 and maximum likelihood versions of Fourier Shell Correlation appropriate for measuring resolution of spherical or cylindrical objects.
Prust CJ, Doerschuk PC, Lander GC, Johnson JE
J Struct Biol ; 167 (3): 185-99.
Published Sep 2009

Appion: an integrated, database-driven pipeline to facilitate EM image processing.
Lander GC, Stagg SM, Voss NR, Cheng A, Fellmann D, Pulokas J, Yoshioka C, Irving C, Mulder A, Lau PW, Lyumkis D, Potter CS, Carragher B
J Struct Biol ; 166 (1): 95-102.
Published Apr 2009

Characterization of large conformational changes and autoproteolysis in the maturation of a T=4 virus capsid.
Matsui T, Lander G, Johnson JE
J Virol ; 83 (2): 1126-34.
Published Jan 2009

Bacteriophage lambda stabilization by auxiliary protein gpD: timing, location, and mechanism of attachment determined by cryo-EM.
Lander GC, Evilevitch A, Jeembaeva M, Potter CS, Carragher B, Johnson JE
Structure ; 16 (9): 1399-406.
Published Sep 10, 2008

Assembly architecture and DNA binding of the bacteriophage P22 terminase small subunit.
Nemecek D, Lander GC, Johnson JE, Casjens SR, Thomas GJ Jr
J Mol Biol ; 383 (3): 494-501.
Published Nov 14, 2008

A test-bed for optimizing high-resolution single particle reconstructions.
Stagg SM, Lander GC, Quispe J, Voss NR, Cheng A, Bradlow H, Bradlow S, Carragher B, Potter CS
J Struct Biol ; 163 (1): 29-39.
Published Jul 2008

Polyvalent display of heme on hepatitis B virus capsid protein through coordination to hexahistidine tags.
Prasuhn DE Jr, Kuzelka J, Strable E, Udit AK, Cho SH, Lander GC, Quispe JD, Diers JR, Bocian DF, Potter C, Carragher B, Finn MG
Chem Biol ; 15 (5): 513-9.
Published May 2008

Unnatural amino acid incorporation into virus-like particles.
Strable E, Prasuhn DE Jr, Udit AK, Brown S, Link AJ, Ngo JT, Lander G, Quispe J, Potter CS, Carragher B, Tirrell DA, Finn MG
Bioconjug Chem ; 19 (4): 866-75.
Published Apr 2008

Development of bacteriophage p22 as a platform for molecular display: genetic and chemical modifications of the procapsid exterior surface.
Kang S, Lander GC, Johnson JE, Prevelige PE
Chembiochem ; 9 (4): 514-8.
Published Mar 3, 2008

Capsid conformational sampling in HK97 maturation visualized by X-ray crystallography and cryo-EM.
Gan L, Speir JA, Conway JF, Lander G, Cheng N, Firek BA, Hendrix RW, Duda RL, Liljas L, Johnson JE
Structure ; 14 (11): 1655-65.
Published Nov 2006

Macromolecular mass spectrometry and electron microscopy as complementary tools for investigation of the heterogeneity of bacteriophage portal assemblies.
Poliakov A, van Duijn E, Lander G, Fu CY, Johnson JE, Prevelige PE Jr, Heck AJ
J Struct Biol ; 157 (2): 371-83.
Published Feb 2007

Automated cryoEM data acquisition and analysis of 284742 particles of GroEL.
Stagg SM, Lander GC, Pulokas J, Fellmann D, Cheng A, Quispe JD, Mallick SP, Avila RM, Carragher B, Potter CS
J Struct Biol ; 155 (3): 470-81.
Published Sep 2006

The structure of an infectious P22 virion shows the signal for headful DNA packaging.
Lander GC, Tang L, Casjens SR, Gilcrease EB, Prevelige P, Poliakov A, Potter CS, Carragher B, Johnson JE
Science ; 312 (5781): 1791-5.
Published Jun 23, 2006

VIPERdb: a relational database for structural virology.
Shepherd CM, Borelli IA, Lander G, Natarajan P, Siddavanahalli V, Bajaj C, Johnson JE, Brooks CL 3rd, Reddy VS
Nucleic Acids Res ; 34 (Database issue): D386-9.
Published Jan 1, 2006

Exploring icosahedral virus structures with VIPER.
Natarajan P, Lander GC, Shepherd CM, Reddy VS, Brooks CL 3rd, Johnson JE
Nat Rev Microbiol ; 3 (10): 809-17.
Published Oct 2005

Functional annotation of the Arabidopsis genome using controlled vocabularies.
Berardini TZ, Mundodi S, Reiser L, Huala E, Garcia-Hernandez M, Zhang P, Mueller LA, Yoon J, Doyle A, Lander G, Moseyko N, Yoo D, Xu I, Zoeckler B, Montoya M, Miller N, Weems D, Rhee SY
Plant Physiol ; 135 (2): 745-55.
Published Jun 2004

The Arabidopsis Information Resource (TAIR): a model organism database providing a centralized, curated gateway to Arabidopsis biology, research materials and community.
Rhee SY, Beavis W, Berardini TZ, Chen G, Dixon D, Doyle A, Garcia-Hernandez M, Huala E, Lander G, Montoya M, Miller N, Mueller LA, Mundodi S, Reiser L, Tacklind J, Weems DC, Wu Y, Xu I, Yoo D, Yoon J, Zhang P
Nucleic Acids Res ; 31 (1): 224-8.
Published Jan 1, 2003